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feat/phase-4b-health-genetics #36

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jason merged 8 commits from feat/phase-4b-health-genetics into master 2026-03-09 23:38:19 -05:00
Conversation 0 Commits 8 Files Changed 8 +113 -48
1 changed files with 113 additions and 48 deletions
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161
server/db/init.js
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@@ -16,28 +16,37 @@ function initDatabase() {
// ── Dogs ────────────────────────────────────────────────────────────
db.exec(`
CREATE TABLE IF NOT EXISTS dogs (
id INTEGER PRIMARY KEY AUTOINCREMENT,
name TEXT NOT NULL,
registration_number TEXT,
breed TEXT NOT NULL,
sex TEXT NOT NULL CHECK(sex IN ('male', 'female')),
birth_date TEXT,
color TEXT,
microchip TEXT,
litter_id INTEGER,
is_active INTEGER DEFAULT 1,
is_champion INTEGER DEFAULT 0,
photo_urls TEXT DEFAULT '[]',
notes TEXT,
created_at TEXT DEFAULT (datetime('now')),
updated_at TEXT DEFAULT (datetime('now'))
id INTEGER PRIMARY KEY AUTOINCREMENT,
name TEXT NOT NULL,
registration_number TEXT,
breed TEXT NOT NULL,
sex TEXT NOT NULL CHECK(sex IN ('male', 'female')),
birth_date TEXT,
color TEXT,
microchip TEXT,
litter_id INTEGER,
is_active INTEGER DEFAULT 1,
is_champion INTEGER DEFAULT 0,
chic_number TEXT,
age_at_death TEXT,
cause_of_death TEXT,
photo_urls TEXT DEFAULT '[]',
notes TEXT,
created_at TEXT DEFAULT (datetime('now')),
updated_at TEXT DEFAULT (datetime('now'))
)
`);
// migrate: add is_champion if missing (safe on existing DBs)
try {
db.exec(`ALTER TABLE dogs ADD COLUMN is_champion INTEGER DEFAULT 0`);
} catch (_) { /* column already exists */ }
// migrate: add columns if missing (safe on existing DBs)
const dogMigrations = [
['is_champion', 'INTEGER DEFAULT 0'],
['chic_number', 'TEXT'],
['age_at_death', 'TEXT'],
['cause_of_death', 'TEXT'],
];
for (const [col, def] of dogMigrations) {
try { db.exec(`ALTER TABLE dogs ADD COLUMN ${col} ${def}`); } catch (_) { /* already exists */ }
}
// ── Parents ─────────────────────────────────────────────────────────
db.exec(`
@@ -51,24 +60,24 @@ function initDatabase() {
)
`);
// ── Breeding Records ────────────────────────────────────────────────
// ── Breeding Records ─────────────────────────────────────────────────
db.exec(`
CREATE TABLE IF NOT EXISTS breeding_records (
id INTEGER PRIMARY KEY AUTOINCREMENT,
sire_id INTEGER NOT NULL,
dam_id INTEGER NOT NULL,
breeding_date TEXT,
due_date TEXT,
conception_method TEXT CHECK(conception_method IN ('natural', 'ai', 'frozen', 'surgical')),
notes TEXT,
created_at TEXT DEFAULT (datetime('now')),
updated_at TEXT DEFAULT (datetime('now')),
id INTEGER PRIMARY KEY AUTOINCREMENT,
sire_id INTEGER NOT NULL,
dam_id INTEGER NOT NULL,
breeding_date TEXT,
due_date TEXT,
conception_method TEXT CHECK(conception_method IN ('natural', 'ai', 'frozen', 'surgical')),
notes TEXT,
created_at TEXT DEFAULT (datetime('now')),
updated_at TEXT DEFAULT (datetime('now')),
FOREIGN KEY (sire_id) REFERENCES dogs(id),
FOREIGN KEY (dam_id) REFERENCES dogs(id)
)
`);
// ── Litters ─────────────────────────────────────────────────────────
// ── Litters ──────────────────────────────────────────────────────────
db.exec(`
CREATE TABLE IF NOT EXISTS litters (
id INTEGER PRIMARY KEY AUTOINCREMENT,
@@ -89,21 +98,81 @@ function initDatabase() {
)
`);
// ── Health Records ──────────────────────────────────────────────────
// ── Health Records (OFA-extended) ────────────────────────────────────
// test_type values: hip_ofa | hip_pennhip | elbow_ofa | heart_ofa |
// heart_echo | eye_caer | thyroid_ofa | dna_panel | vaccination |
// other
// ofa_result values: excellent | good | fair | borderline | mild |
// moderate | severe | normal | abnormal | pass | fail | carrier |
// clear | affected | n/a
db.exec(`
CREATE TABLE IF NOT EXISTS health_records (
id INTEGER PRIMARY KEY AUTOINCREMENT,
dog_id INTEGER NOT NULL,
record_type TEXT NOT NULL,
date TEXT NOT NULL,
title TEXT NOT NULL,
description TEXT,
vet_name TEXT,
notes TEXT,
result TEXT,
next_due TEXT,
created_at TEXT DEFAULT (datetime('now')),
updated_at TEXT DEFAULT (datetime('now')),
id INTEGER PRIMARY KEY AUTOINCREMENT,
dog_id INTEGER NOT NULL,
record_type TEXT NOT NULL,
test_type TEXT,
test_name TEXT,
test_date TEXT NOT NULL,
ofa_result TEXT,
ofa_number TEXT,
performed_by TEXT,
expires_at TEXT,
document_url TEXT,
result TEXT,
vet_name TEXT,
next_due TEXT,
notes TEXT,
created_at TEXT DEFAULT (datetime('now')),
updated_at TEXT DEFAULT (datetime('now')),
FOREIGN KEY (dog_id) REFERENCES dogs(id)
)
`);
// migrate: add OFA-specific columns if missing
const healthMigrations = [
['test_type', 'TEXT'],
['ofa_result', 'TEXT'],
['ofa_number', 'TEXT'],
['performed_by', 'TEXT'],
['expires_at', 'TEXT'],
['document_url', 'TEXT'],
];
for (const [col, def] of healthMigrations) {
try { db.exec(`ALTER TABLE health_records ADD COLUMN ${col} ${def}`); } catch (_) { /* already exists */ }
}
// ── Genetic Tests (DNA Panel) ─────────────────────────────────────────
// result values: clear | carrier | affected | not_tested
// marker examples: PRA1, PRA2, prcd-PRA, GR-PRA1, GR-PRA2, ICH1,
// ICH2, NCL, DM, MD
db.exec(`
CREATE TABLE IF NOT EXISTS genetic_tests (
id INTEGER PRIMARY KEY AUTOINCREMENT,
dog_id INTEGER NOT NULL,
test_provider TEXT,
marker TEXT NOT NULL,
result TEXT NOT NULL CHECK(result IN ('clear', 'carrier', 'affected', 'not_tested')),
test_date TEXT,
document_url TEXT,
notes TEXT,
created_at TEXT DEFAULT (datetime('now')),
updated_at TEXT DEFAULT (datetime('now')),
FOREIGN KEY (dog_id) REFERENCES dogs(id)
)
`);
// ── Cancer History ───────────────────────────────────────────────────
db.exec(`
CREATE TABLE IF NOT EXISTS cancer_history (
id INTEGER PRIMARY KEY AUTOINCREMENT,
dog_id INTEGER NOT NULL,
cancer_type TEXT,
age_at_diagnosis TEXT,
age_at_death TEXT,
cause_of_death TEXT,
notes TEXT,
created_at TEXT DEFAULT (datetime('now')),
updated_at TEXT DEFAULT (datetime('now')),
FOREIGN KEY (dog_id) REFERENCES dogs(id)
)
`);
@@ -126,7 +195,6 @@ function initDatabase() {
)
`);
// migrate: add new kennel columns if missing (safe on existing DBs)
const kennelCols = [
['kennel_name', "TEXT DEFAULT 'BREEDR'"],
['kennel_tagline', 'TEXT'],
@@ -139,12 +207,9 @@ function initDatabase() {
['owner_name', 'TEXT'],
];
for (const [col, def] of kennelCols) {
try {
db.exec(`ALTER TABLE settings ADD COLUMN ${col} ${def}`);
} catch (_) { /* already exists */ }
try { db.exec(`ALTER TABLE settings ADD COLUMN ${col} ${def}`); } catch (_) { /* already exists */ }
}
// Seed a default settings row if none exists
const existing = db.prepare('SELECT id FROM settings LIMIT 1').get();
if (!existing) {
db.prepare(`INSERT INTO settings (kennel_name) VALUES (?)`).run('BREEDR');