feature/external-dogs #50

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jason merged 9 commits from feature/external-dogs into master 2026-03-11 01:01:49 -05:00
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@@ -13,7 +13,8 @@ export default function PairingSimulator() {
const [relationChecking, setRelationChecking] = useState(false) const [relationChecking, setRelationChecking] = useState(false)
useEffect(() => { useEffect(() => {
fetch('/api/dogs') // include_external=1 ensures external sires/dams appear for pairing
fetch('/api/dogs?include_external=1')
.then(r => r.json()) .then(r => r.json())
.then(data => { .then(data => {
setDogs(Array.isArray(data) ? data : (data.dogs || [])) setDogs(Array.isArray(data) ? data : (data.dogs || []))
@@ -54,9 +55,6 @@ export default function PairingSimulator() {
checkRelation(sireId, val) checkRelation(sireId, val)
} }
const males = dogs.filter(d => d.sex === 'male')
const females = dogs.filter(d => d.sex === 'female')
async function handleSimulate(e) { async function handleSimulate(e) {
e.preventDefault() e.preventDefault()
if (!sireId || !damId) return if (!sireId || !damId) return
@@ -64,16 +62,14 @@ export default function PairingSimulator() {
setError(null) setError(null)
setResult(null) setResult(null)
try { try {
const res = await fetch('/api/pedigree/trial-pairing', { const res = await fetch('/api/pedigree/coi', {
method: 'POST', method: 'POST',
headers: { 'Content-Type': 'application/json' }, headers: { 'Content-Type': 'application/json' },
body: JSON.stringify({ sire_id: parseInt(sireId), dam_id: parseInt(damId) }) body: JSON.stringify({ sire_id: parseInt(sireId), dam_id: parseInt(damId) }),
}) })
if (!res.ok) { const data = await res.json()
const err = await res.json() if (!res.ok) throw new Error(data.error || 'Simulation failed')
throw new Error(err.error || 'Failed to calculate') setResult(data)
}
setResult(await res.json())
} catch (err) { } catch (err) {
setError(err.message) setError(err.message)
} finally { } finally {
@@ -81,204 +77,164 @@ export default function PairingSimulator() {
} }
} }
function RiskBadge({ coi, recommendation }) { const males = dogs.filter(d => d.sex === 'male')
const isLow = coi < 5 const females = dogs.filter(d => d.sex === 'female')
const isMed = coi >= 5 && coi < 10
const isHigh = coi >= 10 const coiColor = (coi) => {
return ( if (coi < 0.0625) return 'var(--success)'
<div className={`risk-badge risk-${isLow ? 'low' : isMed ? 'med' : 'high'}`}> if (coi < 0.125) return 'var(--warning)'
{isLow && <CheckCircle size={20} />} return 'var(--danger)'
{isMed && <AlertTriangle size={20} />} }
{isHigh && <XCircle size={20} />}
<span>{recommendation}</span> const coiLabel = (coi) => {
</div> if (coi < 0.0625) return 'Low'
) if (coi < 0.125) return 'Moderate'
if (coi < 0.25) return 'High'
return 'Very High'
} }
return ( return (
<div className="container" style={{ paddingTop: '2rem', paddingBottom: '3rem' }}> <div className="container" style={{ paddingTop: '2rem', paddingBottom: '3rem', maxWidth: '720px' }}>
{/* Header */} <div style={{ display: 'flex', alignItems: 'center', gap: '0.75rem', marginBottom: '0.5rem' }}>
<div style={{ marginBottom: '2rem' }}> <FlaskConical size={28} style={{ color: 'var(--primary)' }} />
<div style={{ display: 'flex', alignItems: 'center', gap: '0.75rem', marginBottom: '0.5rem' }}> <h1 style={{ margin: 0 }}>Pairing Simulator</h1>
<div style={{ width: '2.5rem', height: '2.5rem', borderRadius: 'var(--radius)', background: 'rgba(139,92,246,0.2)', display: 'flex', alignItems: 'center', justifyContent: 'center', color: 'var(--accent)' }}>
<FlaskConical size={20} />
</div>
<h1 style={{ fontSize: '1.75rem', margin: 0 }}>Trial Pairing Simulator</h1>
</div>
<p style={{ color: 'var(--text-muted)', margin: 0 }}>
Select a sire and dam to calculate the estimated inbreeding coefficient (COI) and view common ancestors.
</p>
</div> </div>
<p style={{ color: 'var(--text-muted)', marginBottom: '2rem' }}>
Estimate the Coefficient of Inbreeding (COI) for a hypothetical pairing before breeding.
Includes both kennel and external dogs.
</p>
{/* Selector Card */} <div className="card" style={{ marginBottom: '1.5rem' }}>
<div className="card" style={{ marginBottom: '1.5rem', maxWidth: '720px' }}>
<form onSubmit={handleSimulate}> <form onSubmit={handleSimulate}>
<div className="form-grid" style={{ marginBottom: '1.25rem' }}> <div className="form-grid" style={{ marginBottom: '1rem' }}>
<div className="form-group" style={{ margin: 0 }}> <div className="form-group">
<label className="label">Sire (Male) </label> <label className="label">Sire (Male) *</label>
<select {dogsLoading ? (
value={sireId} <div className="input" style={{ color: 'var(--text-muted)' }}>Loading dogs...</div>
onChange={handleSireChange} ) : (
required <select className="input" value={sireId} onChange={handleSireChange} required>
disabled={dogsLoading} <option value="">Select sire...</option>
> {males.map(d => (
<option value=""> Select Sire </option> <option key={d.id} value={d.id}>
{males.map(d => ( {d.name}{d.is_champion ? ' ✪' : ''}{d.is_external ? ' [Ext]' : ''}
<option key={d.id} value={d.id}> </option>
{d.name}{d.breed ? ` · ${d.breed}` : ''} ))}
</option> </select>
))}
</select>
{!dogsLoading && males.length === 0 && (
<p style={{ color: 'var(--text-muted)', fontSize: '0.8rem', marginTop: '0.4rem' }}>No male dogs registered.</p>
)} )}
</div> </div>
<div className="form-group" style={{ margin: 0 }}> <div className="form-group">
<label className="label">Dam (Female) </label> <label className="label">Dam (Female) *</label>
<select {dogsLoading ? (
value={damId} <div className="input" style={{ color: 'var(--text-muted)' }}>Loading dogs...</div>
onChange={handleDamChange} ) : (
required <select className="input" value={damId} onChange={handleDamChange} required>
disabled={dogsLoading} <option value="">Select dam...</option>
> {females.map(d => (
<option value=""> Select Dam </option> <option key={d.id} value={d.id}>
{females.map(d => ( {d.name}{d.is_champion ? ' ✪' : ''}{d.is_external ? ' [Ext]' : ''}
<option key={d.id} value={d.id}> </option>
{d.name}{d.breed ? ` · ${d.breed}` : ''} ))}
</option> </select>
))}
</select>
{!dogsLoading && females.length === 0 && (
<p style={{ color: 'var(--text-muted)', fontSize: '0.8rem', marginTop: '0.4rem' }}>No female dogs registered.</p>
)} )}
</div> </div>
</div> </div>
{/* Direct-relation warning banner */}
{relationChecking && ( {relationChecking && (
<p style={{ fontSize: '0.8125rem', color: 'var(--text-muted)', marginBottom: '1rem' }}>Checking relationship</p> <div style={{ fontSize: '0.85rem', color: 'var(--text-muted)', marginBottom: '0.75rem' }}>
Checking relationship...
</div>
)} )}
{!relationChecking && relationWarning && (
{relationWarning && !relationChecking && (
<div style={{ <div style={{
display: 'flex', alignItems: 'flex-start', gap: '0.6rem', display: 'flex', alignItems: 'center', gap: '0.5rem',
background: 'rgba(234,179,8,0.12)', border: '1px solid rgba(234,179,8,0.4)', padding: '0.6rem 1rem', marginBottom: '0.75rem',
borderRadius: 'var(--radius-sm)', padding: '0.75rem 1rem', marginBottom: '1rem' background: 'rgba(239,68,68,0.08)', border: '1px solid rgba(239,68,68,0.3)',
borderRadius: 'var(--radius)', fontSize: '0.875rem', color: 'var(--danger)',
}}> }}>
<ShieldAlert size={18} style={{ color: '#eab308', flexShrink: 0, marginTop: '0.1rem' }} /> <ShieldAlert size={16} />
<div> <strong>Related:</strong>&nbsp;{relationWarning}
<p style={{ margin: 0, fontWeight: 600, color: '#eab308', fontSize: '0.875rem' }}>Direct Relation Detected</p>
<p style={{ margin: '0.2rem 0 0', fontSize: '0.8125rem', color: 'var(--text-secondary)' }}>
{relationWarning}. COI will reflect the high inbreeding coefficient for this pairing.
</p>
</div>
</div> </div>
)} )}
<button <button
type="submit" type="submit"
className="btn btn-primary" className="btn btn-primary"
disabled={!sireId || !damId || loading || relationChecking} disabled={loading || dogsLoading || !sireId || !damId}
style={{ minWidth: '160px' }} style={{ width: '100%' }}
> >
{loading ? 'Calculating' : <><FlaskConical size={16} /> Simulate Pairing</>} {loading ? 'Simulating...' : <><GitMerge size={16} style={{ marginRight: '0.4rem' }} />Simulate Pairing</>}
</button> </button>
</form> </form>
</div> </div>
{/* Error */} {error && (
{error && <div className="error" style={{ maxWidth: '720px' }}>{error}</div>} <div className="card" style={{ borderColor: 'var(--danger)', marginBottom: '1.5rem' }}>
<div style={{ display: 'flex', alignItems: 'center', gap: '0.5rem', color: 'var(--danger)' }}>
<XCircle size={18} />
<strong>Error:</strong> {error}
</div>
</div>
)}
{/* Results */}
{result && ( {result && (
<div style={{ maxWidth: '720px' }}> <div className="card">
{/* Direct-relation alert in results */} <h2 style={{ fontSize: '1rem', marginBottom: '1.25rem', color: 'var(--text-muted)', textTransform: 'uppercase', letterSpacing: '0.05em' }}>
{result.directRelation && ( Simulation Result
<div style={{ </h2>
display: 'flex', alignItems: 'flex-start', gap: '0.6rem',
background: 'rgba(239,68,68,0.1)', border: '1px solid rgba(239,68,68,0.35)', <div style={{
borderRadius: 'var(--radius-sm)', padding: '0.75rem 1rem', marginBottom: '1.25rem' display: 'flex', alignItems: 'center', gap: '1rem',
}}> padding: '1.25rem', marginBottom: '1rem',
<ShieldAlert size={18} style={{ color: 'var(--danger)', flexShrink: 0, marginTop: '0.1rem' }} /> background: 'var(--bg-primary)', borderRadius: 'var(--radius)',
<div> border: `2px solid ${coiColor(result.coi)}`,
<p style={{ margin: 0, fontWeight: 600, color: 'var(--danger)', fontSize: '0.875rem' }}>Direct Relation High Inbreeding Risk</p> }}>
<p style={{ margin: '0.2rem 0 0', fontSize: '0.8125rem', color: 'var(--text-secondary)' }}>{result.directRelation}</p> {result.coi < 0.0625
? <CheckCircle size={32} style={{ color: coiColor(result.coi), flexShrink: 0 }} />
: <AlertTriangle size={32} style={{ color: coiColor(result.coi), flexShrink: 0 }} />
}
<div>
<div style={{ fontSize: '2rem', fontWeight: 700, color: coiColor(result.coi), lineHeight: 1 }}>
{(result.coi * 100).toFixed(2)}%
</div>
<div style={{ color: 'var(--text-muted)', fontSize: '0.875rem' }}>
COI &mdash; <strong style={{ color: coiColor(result.coi) }}>{coiLabel(result.coi)}</strong>
</div>
</div>
</div>
{result.common_ancestors && result.common_ancestors.length > 0 && (
<div>
<h3 style={{ fontSize: '0.875rem', color: 'var(--text-muted)', textTransform: 'uppercase', letterSpacing: '0.05em', marginBottom: '0.5rem' }}>
Common Ancestors ({result.common_ancestors.length})
</h3>
<div style={{ display: 'flex', flexWrap: 'wrap', gap: '0.4rem' }}>
{result.common_ancestors.map((a, i) => (
<span key={i} style={{
padding: '0.2rem 0.6rem',
background: 'var(--bg-tertiary)',
borderRadius: 'var(--radius-sm)',
fontSize: '0.8rem',
border: '1px solid var(--border)',
}}>{a}</span>
))}
</div> </div>
</div> </div>
)} )}
{/* COI Summary */} {result.recommendation && (
<div className="card" style={{ marginBottom: '1.25rem' }}> <div style={{
<div style={{ display: 'flex', justifyContent: 'space-between', alignItems: 'flex-start', flexWrap: 'wrap', gap: '1rem' }}> marginTop: '1rem', padding: '0.75rem 1rem',
<div> background: result.coi < 0.0625 ? 'rgba(34,197,94,0.08)' : 'rgba(239,68,68,0.08)',
<p style={{ color: 'var(--text-muted)', fontSize: '0.8125rem', textTransform: 'uppercase', letterSpacing: '0.05em', fontWeight: 500, marginBottom: '0.25rem' }}>Pairing</p> borderRadius: 'var(--radius)',
<p style={{ fontSize: '1.125rem', fontWeight: 600, margin: 0 }}> border: `1px solid ${result.coi < 0.0625 ? 'rgba(34,197,94,0.3)' : 'rgba(239,68,68,0.3)'}`,
<span style={{ color: '#60a5fa' }}>{result.sire.name}</span> fontSize: '0.875rem',
<span style={{ color: 'var(--text-muted)', margin: '0 0.5rem' }}>×</span> color: 'var(--text-secondary)',
<span style={{ color: '#f472b6' }}>{result.dam.name}</span> }}>
</p> {result.recommendation}
</div>
<div style={{ textAlign: 'right' }}>
<p style={{ color: 'var(--text-muted)', fontSize: '0.8125rem', textTransform: 'uppercase', letterSpacing: '0.05em', fontWeight: 500, marginBottom: '0.25rem' }}>COI</p>
<p style={{
fontSize: '2rem', fontWeight: 700, lineHeight: 1,
color: result.coi < 5 ? 'var(--success)' : result.coi < 10 ? 'var(--warning)' : 'var(--danger)'
}}>
{result.coi.toFixed(2)}%
</p>
</div>
</div> </div>
)}
<div style={{ marginTop: '1.25rem' }}>
<RiskBadge coi={result.coi} recommendation={result.recommendation} />
</div>
<div style={{ marginTop: '1rem', padding: '0.75rem', background: 'var(--bg-tertiary)', borderRadius: 'var(--radius-sm)', fontSize: '0.8125rem', color: 'var(--text-secondary)' }}>
<strong>COI Guide:</strong> &lt;5% Low risk · 510% Moderate risk · &gt;10% High risk
</div>
</div>
{/* Common Ancestors */}
<div className="card">
<div style={{ display: 'flex', alignItems: 'center', gap: '0.5rem', marginBottom: '1rem' }}>
<GitMerge size={18} style={{ color: 'var(--accent)' }} />
<h3 style={{ margin: 0, fontSize: '1rem' }}>Common Ancestors</h3>
<span className="badge badge-primary" style={{ marginLeft: 'auto' }}>
{result.commonAncestors.length} found
</span>
</div>
{result.commonAncestors.length === 0 ? (
<p style={{ color: 'var(--text-muted)', textAlign: 'center', padding: '1.5rem 0', margin: 0 }}>
No common ancestors found within 6 generations. This pairing has excellent genetic diversity.
</p>
) : (
<div style={{ overflowX: 'auto' }}>
<table style={{ width: '100%', borderCollapse: 'collapse', fontSize: '0.875rem' }}>
<thead>
<tr style={{ borderBottom: '1px solid var(--border)' }}>
<th style={{ textAlign: 'left', padding: '0.625rem 0.75rem', color: 'var(--text-muted)', fontWeight: 500, fontSize: '0.75rem', textTransform: 'uppercase', letterSpacing: '0.05em' }}>Ancestor</th>
<th style={{ textAlign: 'center', padding: '0.625rem 0.75rem', color: 'var(--text-muted)', fontWeight: 500, fontSize: '0.75rem', textTransform: 'uppercase', letterSpacing: '0.05em' }}>Sire Gen</th>
<th style={{ textAlign: 'center', padding: '0.625rem 0.75rem', color: 'var(--text-muted)', fontWeight: 500, fontSize: '0.75rem', textTransform: 'uppercase', letterSpacing: '0.05em' }}>Dam Gen</th>
</tr>
</thead>
<tbody>
{result.commonAncestors.map((anc, i) => (
<tr key={i} style={{ borderBottom: '1px solid var(--border)' }}>
<td style={{ padding: '0.625rem 0.75rem', fontWeight: 500 }}>{anc.name}</td>
<td style={{ padding: '0.625rem 0.75rem', textAlign: 'center' }}>
<span className="badge badge-primary">Gen {anc.sireGen}</span>
</td>
<td style={{ padding: '0.625rem 0.75rem', textAlign: 'center' }}>
<span className="badge" style={{ background: 'rgba(244,114,182,0.15)', color: '#f472b6' }}>Gen {anc.damGen}</span>
</td>
</tr>
))}
</tbody>
</table>
</div>
)}
</div>
</div> </div>
)} )}
</div> </div>