`tool_diary_write` stored the `agent` metadata verbatim after `sanitize_name`
(which preserves case), while `tool_diary_read` filtered by exact match —
so writing as "Claude" and reading as "claude" silently returned zero rows.
Both endpoints now lowercase `agent_name` immediately after sanitization.
The default per-agent wing slug is also stable across casings since it's
derived from the same normalized form.
Behavior change: entries written prior to this fix under mixed-case agent
names will not match the new lowercase filter; documented under v3.3.5
in CHANGELOG with a `mempalace repair` pointer.
Adds a regression test (`test_diary_read_case_insensitive_agent`) and
updates the existing `test_diary_write_and_read` to assert the new
lowercase agent identity.
Closes#1243
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
PR #1173 wired quarantine_stale_hnsw into the static make_client() helper
but not into the instance _client() method. As a result every non-MCP
entry point (CLI mining, search, repair, status) — which all use
get_collection / _get_or_create_collection / _client() — skipped the
cold-start quarantine pass and could SIGSEGV on a stale HNSW segment
left over from a partial flush, replicated palace, or crashed-mid-write.
Refactor: extract the (_fix_blob_seq_ids + gated quarantine_stale_hnsw)
pre-open pass into a single private static helper
ChromaBackend._prepare_palace_for_open(). Both make_client() and
_client() now route through it, so the _quarantined_paths once-per-
palace-per-process gate is preserved (no runtime thrash on hot paths)
and behaviour stays identical — the fix is purely about extending the
existing protection to the path that was missing it.
Tests:
- test_client_quarantines_corrupt_segment_on_first_open mirrors the
existing make_client test and verifies _client() actually renames a
corrupt segment on first open.
- test_client_quarantines_only_on_first_call_per_palace verifies the
cache gate prevents re-running quarantine across repeated _client()
calls — important because _client() is hit on every backend op.
Closes#1121. Closes#1132. Closes#1263.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
cmd_init was instantiating MempalaceConfig() unconditionally, ignoring
args.palace and always writing the palace under ~/.mempalace. Mirror
the env-var pattern used by mcp_server.py (and consistent with how
cmd_mine / cmd_status / cmd_search resolve --palace) so every
downstream read of cfg.palace_path inside cmd_init — Pass 0,
cfg.init(), and the post-init mine — routes to the user-specified
location.
Adds tests/test_cli.py::test_cmd_init_honors_palace_flag covering the
regression: asserts Pass 0 receives the --palace value (not
~/.mempalace) and that MEMPALACE_PALACE_PATH is set in os.environ.
Closes#1313.
`tool_kg_add` previously accepted only `valid_from` and `source_closet`,
silently dropping `valid_to`, `source_file`, and `source_drawer_id` at
the MCP boundary. Backfilling already-ended historical facts therefore
collapsed to "still current," and adapter provenance never reached
the SQLite layer even though `KnowledgeGraph.add_triple` already
supported every column.
`tool_kg_invalidate` returned the literal string `"today"` whenever the
caller omitted `ended`, hiding the actual stamped date from anyone trying
to verify what got persisted.
Changes:
- Extend `tool_kg_add` signature + MCP input_schema with `valid_to`,
`source_file`, `source_drawer_id`; forward all of them to
`_kg.add_triple` and to the WAL log.
- Resolve `ended` to `date.today().isoformat()` in `tool_kg_invalidate`
before logging / returning, so the response always reports the actual
date stored in `valid_to`.
- Add regression tests for valid_to round-trip, source_file /
source_drawer_id provenance, and the resolved-ended-date contract.
- Leave TODO(#1283) markers so the open ISO-8601 validation PR can drop
`validate_iso_date` over `valid_from` / `valid_to` / `ended` cleanly.
The underlying `KnowledgeGraph.add_triple` already accepted these
kwargs (RFC 002 §5.5) — only the MCP edge needed wiring up.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
`cmd_compress` was writing AAAK-compressed drawers to a `mempalace_compressed`
collection, but every read path (`palace.get_closets_collection`,
`searcher.py`, `repair.py`) reads from `mempalace_closets`. Result: for
non-mined palaces (or any palace where the user ran `mempalace compress`
expecting to backfill the closet/index layer), the compressed output was
silently invisible — written to a collection nothing else opens.
Fix the writer rather than renaming the readers: "closets" is the
user-visible feature name baked into the public API
(`get_closets_collection`), the searcher hybrid path, repair/HNSW
diagnostics, and docs. Renaming the readers would churn 15+ call sites
and the README for no benefit. The compressed AAAK strings are exactly
what closets are conceptually — compact pointers scanned by an LLM to
locate the right drawer — so they belong in `mempalace_closets`.
Tests:
- Update `test_cmd_compress_stores_results` to assert the collection
name passed to `get_or_create_collection` is `mempalace_closets`.
- Add `test_cmd_compress_output_readable_via_get_closets_collection`:
end-to-end with a real ChromaBackend, seed a drawer, run cmd_compress,
then read back via the same `get_closets_collection` helper that
palace.py / searcher use. Regression test for the wrong-collection
bug.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Both @igorls and the Qodo bot flagged that `_palace_root_exists()` used
`Path.exists()`, which returns True for a regular file. A stray file at
`~/.mempalace` would let the kill-switch be bypassed and crash later in
`STATE_DIR.mkdir()` with NotADirectoryError.
Switched to `Path.is_dir()`. Also fold `_log()`'s inline check through
`_palace_root_exists()` so both kill-switch sites use the same predicate.
New test pins the behavior: a regular file at the palace root path is
treated as absent (hook short-circuits, _log does not crash, the stray
file is left untouched).
When the user removes ~/.mempalace/ (a strong "do not auto-capture"
signal), the next hook fire would silently recreate the entire dir
hierarchy and ingest existing transcripts:
1. _log() at hooks_cli.py:148 unconditionally calls
STATE_DIR.mkdir(parents=True, exist_ok=True), so the act of
writing the hook log line recreated ~/.mempalace/hook_state/
2. With no config file present, hook_stop_auto_save and
hook_precompact_auto_save defaulted to True (no override to read)
3. The full save path then ran, materializing palace/, wal/,
knowledge_graph.sqlite3, and N drawers from existing transcripts
in ~/.claude/projects/*.jsonl
All four entry points (hook_stop, hook_precompact, hook_session_start,
and _log itself) now check a new PALACE_ROOT = Path.home() / ".mempalace"
constant first and short-circuit (returning {} on stdout, never logging)
when the dir is absent. The user-removable directory is now a kill-switch.
Five unit tests in tests/test_hooks_cli.py cover: hook_stop /
hook_precompact / hook_session_start do not create the dir when absent;
_log() does not create it when absent; existing dir proceeds normally
(regression).
Caught in the wild on a downstream fork: ~146 drawers materialized in
under a second after a deliberate `rm -rf ~/.mempalace/`, into a planning
session that was explicitly not meant to be captured.
Shell splits hook command on whitespace after variable expansion, breaking
paths with spaces (e.g. C:\Users\Richard M on Windows). Wrapping the path
in double quotes preserves the token boundary.
Fixes the reported Stop/PreCompact pair in .claude-plugin/hooks/hooks.json
and applies the same fix to .codex-plugin/hooks.json (SessionStart/Stop/
PreCompact), which carries the identical bug.
Default search behavior is unchanged. Opt-in candidate_strategy="union"
also pulls top-K BM25-only candidates from sqlite FTS5 and merges them
into the rerank pool, catching docs with strong BM25 signal that the
vector index didn't surface in the over-fetch window.
Motivation
----------
The current hybrid path gathers candidates from the vector index only
(n_results * 3 over-fetch), then BM25-reranks within them. When the
query embeds close to the wrong content semantically, the right doc
never enters the rerank pool — *no matter how wide the over-fetch*.
Tested on a ~6K-document mixed corpus (knowledge prose + short structured
records): at *30x* over-fetch (~5% of the corpus) the target doc still
didn't surface for narrative-shaped queries targeting terminology guides.
Wider over-fetch isn't the answer; widening the pool's *source* is.
Concrete failure mode: a narrative-shaped query embeds close to records
sharing the same operational vocabulary (other narrative entries in the
corpus). A terminology / style guide is BM25-strong for the query
(rare keywords the guide repeats) but vector-distant. Vector-only
candidates don't include it; BM25 never gets to rerank it. The hybrid
path produces 0.00 recall on a probe that pure BM25 alone scores 1.00 —
the hybrid is worse than its component on the same input.
Behavior change
---------------
* New parameter ``candidate_strategy: str = "vector"`` on ``search_memories``.
- ``"vector"`` (default): historical behavior, no change.
- ``"union"``: also fetch top ``n_results * 3`` candidates via the
existing ``_bm25_only_via_sqlite`` helper, dedupe by source_file,
merge into the rerank pool. BM25-only candidates carry
``distance=None`` so they're scored on BM25 contribution alone
(vec_sim coerces to 0).
* ``_hybrid_rank`` now handles ``distance=None`` explicitly, scoring
such candidates as vector-unknown (vec_sim=0) rather than treating
it as max-distance via shim.
* New strategies register via ``_CANDIDATE_MERGERS``; dispatch is in
``_apply_candidate_strategy`` so ``search_memories`` stays under the
C901 complexity ceiling.
Bench numbers (~6K-doc internal mixed corpus, recall@10, 5 probes spanning
policy-exception lookup, temporal-decay, style retrieval, set-difference,
and pattern-recognition):
baseline ("vector") "union"
policy-exception probe 0.00 0.50 +0.50
temporal-decay probe 0.17 0.50 +0.33
style-retrieval probe 0.00 1.00 +1.00 (PASSES)
set-difference probe 0.00–0.06 0.06–0.09 ~
pattern-recog probe 0.64 (stable) 0.50–0.71 variance, typ. +0.07
macro recall 0.16–0.17 0.51–0.56 +0.34 to +0.40
The pattern-recog variance points at a related issue worth a separate PR:
``_hybrid_rank`` computes BM25 IDF over the candidate set. Adding new
candidates re-normalizes BM25 for *existing* candidates non-monotonically.
Stable corpus-wide BM25 would remove this. Out of scope here.
Tests
-----
``tests/test_hybrid_candidate_union.py`` (6 tests, all pass):
- default behavior unchanged (explicit ``"vector"`` matches default)
- ``"union"`` surfaces a BM25-strong vector-distant doc
- ``"union"`` doesn't drop docs ``"vector"`` would have found
- empty-palace handling
- invalid ``candidate_strategy`` raises
- ``_hybrid_rank`` tolerates ``distance=None``
Existing ``test_hybrid_search.py`` (5) and ``test_searcher.py`` (27) pass.
Performance note
----------------
Each ``"union"`` query adds one sqlite open + FTS5 MATCH + metadata
fetch (via the existing ``_bm25_only_via_sqlite`` helper, which already
runs as the ``vector_disabled`` fallback path so the code is
well-trodden). Per-query overhead is small but unmeasured at corpus
scale. Default stays ``"vector"`` until a maintainer characterizes the
cost.
- Resolve the EF inside the two reopen branches that actually call
`client.get_collection` / `client.create_collection`, so warm-cache
reads stay zero-cost (no `MempalaceConfig()` / `_resolve_providers`
on every tool call).
- Reuse `ChromaBackend._resolve_embedding_function()` instead of
duplicating its try/except + log message + None-fallback.
- Reword the inline + CHANGELOG explanation to clarify that ChromaDB 1.x
persists the EF *identity* (its `name()`) but not the *instance/
configuration* — `mempalace.embedding` documents this and spoofs
`name()` to `"default"` precisely so the identity check passes; the
bug was the *provider list* (lazy ONNX selection) silently differing.
`mcp_server._get_collection` bypassed `ChromaBackend.get_collection`
and called `client.get_collection` / `client.create_collection` without
`embedding_function=`. ChromaDB 1.x does not persist the EF identity
with the collection, so the MCP server's reopen silently bound
chromadb's built-in `DefaultEmbeddingFunction` while the miner / Stop
hook ingest path bound `mempalace.embedding.get_embedding_function()`.
On bleeding-edge interpreters (python 3.14 + chromadb 1.5.x on Apple
Silicon, per #1299) the default EF's lazy ONNX provider selection could
SIGSEGV the host process on first `col.add()`, killing the MCP stdio
server and leaving every subsequent tool call returning
`Connection closed` until Claude Code was relaunched. Reads worked
because `col.get(ids=...)` and metadata fetches don't invoke the EF;
the auto-ingest path worked because mining routes through the backend
abstraction. Diary writes were the consistent failure surface.
Resolve the EF up front (matching `ChromaBackend._resolve_embedding_function`)
and pass it into both reopen branches. Falls back to the chromadb default
only if `mempalace.embedding.get_embedding_function` itself raises.
Regression test patches the chromadb client class to capture
`embedding_function=` on every `get_collection` / `create_collection`
call from `_get_collection(create=True)` and `_get_collection()`, and
fails if any call omits it.
Follow-up to #1262 / #1289 (which fixed the metadata-mismatch SIGSEGV
path); this addresses the EF-mismatch SIGSEGV path on the same surface.
Rollback cleanup was instantiating a fresh ChromaBackend, so the live backend that had opened the PersistentClient could keep file handles alive during restore. Close the active backend instance instead so rollback and CLI recovery can release Windows-safe locks before copying the backup back into place.
#1262 split `get_or_create_collection` into `get_collection` + fallback
`create_collection` inside `ChromaBackend.get_collection`, fixing the
chromadb 1.5.x Rust-binding SIGSEGV that fires when stored collection
metadata differs from the call-site's `_HNSW_BLOAT_GUARD` payload.
The MCP server's `_get_collection(create=True)` carries the same metadata
payload at `mcp_server.py:287` and routes through chromadb's Python
client directly, bypassing the backend layer. Both `tool_add_drawer`
and `tool_diary_write` reach this site on every invocation, and the
Stop hook fires `mempalace_diary_write` at session end — which was
exactly the crash path #1089 named.
Apply the same try/except split here so legacy palaces whose stored
metadata predates the bloat-guard expansion no longer crash on the
MCP-server reopen path. Regression test patches
`get_or_create_collection` at the chromadb client class level (not the
instance — chromadb's mtime-change detection rebuilds the client between
calls, so an instance-level spy doesn't survive) and asserts the second
`_get_collection(create=True)` call never reaches it.
`_compute_heuristic_seq_id` ran `int(row[0])` directly on the result
of `MAX(e.seq_id)`. On palaces where chromadb 1.5.x has been writing
seq_ids natively (8-byte big-endian uint64 BLOB), that raises
`ValueError: invalid literal for int() with base 10: b'...'` before
the dry-run can print, leaving users with no path through the
recovery feature added in #1135 — the only documented un-poison
route for palaces hit by the original PR #664 shim bug.
Decode BLOB return values via `int.from_bytes(val, "big")` and
keep the existing `int(val)` path for INTEGER rows. Regression
test seeds a BLOB row in `embeddings.seq_id` and asserts the
heuristic surfaces the correct integer.
The capacity probe added in #1227 hardcoded a 2,000-row floor for the
"diverged" decision. The comment justifying that number explicitly tied
it to chromadb's *default* sync_threshold of 1,000 — "Two synchronization
windows worth (2 × sync_threshold = 2000) is a safe steady-state ceiling".
#1191 then bumped sync_threshold to 50,000 via _HNSW_BLOAT_GUARD without
updating the floor. Result: any palace created with the bloat guard
flips between OK and DIVERGED on every flush cycle. Steady-state
divergence sits at 0–50K (the natural queue depth), and the 2,000 floor
trips the guardrail the moment the queue exceeds 10% of sqlite_count.
The MCP server then routes search to BM25-only and disables duplicate
detection for ~80% of the write cycle on actively-mined ≥100K palaces,
even though chromadb is behaving correctly.
This change reads the configured `hnsw:sync_threshold` from
`collection_metadata` per palace and scales the floor to 2 × that value.
The 10% relative term and the original #1222 detection capability are
unchanged — a 91%-missing-of-192K palace (the actual #1222 reproducer)
still trips, regardless of whether the collection was created with
sync_threshold=1000 or 50000.
Behavior summary:
| Collection's sync_threshold | New floor | Old floor |
|---|---|---|
| Missing (legacy palace) | 2000 | 2000 (unchanged)
| 1000 (chromadb default) | 2000 | 2000 (unchanged)
| 50000 (#1191 bloat guard) | 100000 | 2000 (the bug)
Tests:
- test_capacity_status_tolerates_lag_under_large_sync_threshold (regression
for the #1191/#1227 conflict — 100K sqlite + 50K HNSW + sync=50K → OK)
- test_capacity_status_still_flags_real_corruption_under_large_sync (#1222
shape with bloat-guard collection — still detects corruption)
- test_capacity_status_default_threshold_when_no_sync_metadata (legacy
palaces without the metadata row use the 2000 fallback floor)
- test_unflushed_path_also_uses_dynamic_floor (the never-flushed branch
scales too — 30K under sync_threshold=50000 is no longer flagged)
All 18 pre-existing tests in tests/test_hnsw_capacity.py and 45 tests
in tests/test_backends.py still pass.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
Per qodo-ai review on PR #1167: sanitize_iso_date() previously accepted
YYYY and YYYY-MM, but KnowledgeGraph.query_entity() compares valid_from/
valid_to TEXT columns lexicographically against as_of. Lexicographic
comparison treats '2026-01-01' as greater than '2026' (because '-' >
end-of-string), so partial as_of values silently excluded valid facts —
re-introducing the silent-empty-results problem this PR was meant to
fix.
Tighten _ISO_DATE_RE to require YYYY-MM-DD only. Update docstring and
error message accordingly. Invert the two test cases that asserted
partials were accepted.
tool_kg_query (as_of), tool_kg_add (valid_from), and tool_kg_invalidate
(ended) accepted any string and forwarded it to SQLite without format
validation. Parameterized queries prevent SQL injection, but invalid
date strings silently produce empty result sets — callers cannot
distinguish "no fact at this time" from "your date format was
unrecognized." This is especially painful for natural-language LLM
callers that synthesize dates like "March 2026" or "Jan 2025".
Add sanitize_iso_date() in config.py alongside the other input
validators. It accepts YYYY, YYYY-MM, and YYYY-MM-DD forms; passes
through None/empty; and raises ValueError with a field-named message
on anything else. Call it from the three kg MCP tool wrappers before
values reach the storage layer so the caller gets a clear error
instead of a silent miss.
Closes#1164
Mirror the pagination pattern PR #851 landed in miner.py:status().
A single drawers_col.get(limit=total, ...) on palaces larger than
SQLite's SQLITE_MAX_VARIABLE_NUMBER (32766) crashes inside chromadb.
Fetch drawers in batch_size=5000 chunks, stepping offset until the
collection is drained. by_source aggregation semantics are preserved
exactly — grouping, wing filter, meta capture all unchanged.
Closes#1073. Related: #802, #850, #1016.
Adds a fifth format adapter to mempalace.normalize alongside the
existing Claude Code, Codex, Claude.ai, ChatGPT, and Slack parsers.
After this lands, mempalace mine --mode convos ingests Gemini CLI
session history without manual export.
Why now: Claude Code and Codex CLI are already supported by convo_miner;
adding Gemini closes the major-CLI-tool coverage gap. After this lands,
the README's "verbatim conversation history" promise is honestly
delivered for all three top-tier API-keyed coding CLIs (Claude Code,
Codex CLI, Gemini CLI), not just two of them. This is the third leg
of the trio Aya pushed for so the public claim matches the actual
ingest pipeline.
Gemini CLI stores sessions at ~/.gemini/tmp/<project_hash>/chats/ as
JSONL. The on-disk schema (per google-gemini/gemini-cli#15292):
{"type":"session_metadata","sessionId":"...","projectHash":"...",...}
{"type":"user","id":"msg1","content":[{"text":"Hello"}]}
{"type":"gemini","id":"msg2","content":[{"text":"Hi"}]}
{"type":"message_update","id":"msg2","tokens":{"input":10,"output":5}}
The new _try_gemini_jsonl parser:
- requires a session_metadata record so it does not false-positive
against Claude Code or Codex JSONL passing through the dispatch
chain in _try_normalize_json
- extracts user/gemini message text from each entry's content array
of {"text": "..."} blocks, joining multiple blocks per message
in order
- skips message_update entries (token-count deltas with no message
text) and any other unknown record types
- returns None when fewer than two conversational messages are
present, mirroring the codex parser's >=2-message guard
Test coverage: 9 new unit tests in tests/test_normalize.py mirroring
the codex test pattern - happy path, multi-turn, missing session
metadata, message_update skip, single-message rejection, multi-block
content concatenation, empty content skip, malformed-line resilience,
and explicit no-match against codex JSONL fixtures. Schema-level only;
real Gemini CLI session fixtures are a follow-up once a real user file
is available.
Closes part of #59 (the Gemini CLI portion of the umbrella request).
Adds api_key_source provenance ('flag' | 'env' | None) to LLMProvider
so cmd_init can distinguish a key passed via --llm-api-key (explicit
opt-in) from one silently picked up via OPENAI_API_KEY / ANTHROPIC_API_KEY
shell env (stray credential).
When the endpoint is external AND api_key_source == 'env', init now
prints a blocking [y/N] prompt before any data is sent. Anything other
than 'y' drops the LLM and falls back to heuristics-only.
Adds --accept-external-llm flag for CI / non-interactive bypass.
Completes the UX gap in #1224: the URL-based warning was informational
and init kept running, so a user who didn't notice the line had already
leaked. The consent prompt is the actual gate; explicit flag-passed keys
remain treated as already-consented.
``def _normalize_wing(wing: str | None) -> str | None`` uses PEP 604
union syntax which requires Python 3.10+ at runtime. The project still
declares ``python_requires=">=3.9"`` and CI runs the test-linux (3.9)
matrix, where every test in ``tests/test_palace_graph*`` errors out
before collection with ``TypeError: unsupported operand type(s) for |``.
Added ``from __future__ import annotations`` so all annotations in
this module are evaluated lazily as strings — the union syntax is then
accepted on 3.9 without needing to rewrite to ``Optional[str]``.
Surfaced after rebasing this PR onto current develop.
cmd_init now invokes ``_run_pass_zero`` unconditionally (#1221, #1223
landed on develop after this PR's branch point). The pass reads sample
content via ``builtins.open``; with that mocked to MagicMock, the
downstream ``"\\n\\n".join(samples)`` in
``corpus_origin.detect_origin_heuristic`` raises
``TypeError: expected str instance, MagicMock found``.
This test only cares about the wing-slug write to the registry, so
stub the pass-zero call directly rather than try to satisfy its full
sample-gathering contract.
Two follow-ups against the review on this PR:
1. ``miner.load_config`` no-yaml fallback was returning the raw dirname
as the wing, while ``cmd_init`` writes ``topics_by_wing`` under the
normalized slug. A hyphenated project mined without a ``mempalace.yaml``
file silently lost every topic tunnel — same key-miss class as #1194,
just down the no-yaml branch (raised by Qodo on this PR).
2. ``convo_miner`` was applying the lower/replace rule inline at one
call site. Now folded through ``normalize_wing_name`` so all wing-slug
producers — ``cmd_init``, ``room_detector_local``, ``miner.load_config``
fallback, ``convo_miner`` — share a single source of truth. No
behavior change for any input; pure consolidation.
Added ``test_load_config_no_yaml_normalizes_hyphenated_wing`` to lock
the fallback path to the normalized slug — fails on develop without
the miner change.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
`init` was recording `topics_by_wing[<raw-dirname>]` while `mempalace.yaml`
got the lower-cased separator-collapsed slug. At mine time the miner
read the slug from the yaml and missed the registry key, so
`_compute_topic_tunnels_for_wing` returned 0 silently for every project
whose folder contained a `-` or a space — the most common shape in the
wild.
Extracted the rule into `config.normalize_wing_name()` and routed both
`cli.cmd_init` (registry write) and `room_detector_local.detect_rooms_local`
(yaml write) through it. Added a regression test in `test_cli.py`
asserting the registry call uses the normalized slug, plus four direct
unit tests for the helper.
Refs #1180.
Co-Authored-By: Claude Opus 4.7 (1M context) <noreply@anthropic.com>
The narrowed _fix_blob_seq_ids returned early when safe_rows was empty,
but #1177's marker contract requires the marker to be written on every
successful pass — even no-op — so subsequent opens skip the sqlite3
connection entirely. Without this, palaces that have no genuine 0.6.x
BLOBs but DO have sysdb-10-prefixed rows would re-open sqlite3 on every
call, defeating the #1090 corruption guard.
Restructured the conditional so the marker write is unconditional after
a successful sqlite scan, regardless of whether any rows were updated.
Surfaced by test_fix_blob_seq_ids_writes_marker_when_already_integer
during the develop-rebase of this PR. The author's branch predates the
marker contract from #1177 (merged 2026-04-26), so this is a rebase-edge
fix-up rather than a logic change to their narrowing behaviour.